Indicate what you want to display in your molecular representation using the selection options of the GPCRmd Viewer.
You can choose one of the selections we propose or define a new one (Customized selection option) using the NGL selection language.
Protein residues can be indicated as generic GPCR residue numbers (Ballesteros-Weinstein or GPCRdb structure-based numbering).
The hydrogen bonding network has been generated using Flare Plots, powered by R. Fonseca and A. J. Venkatakrishnan.
Left button hold and move: rotate camera around center.
Left button click: pick atom or distance.
Middle button hold and move: zoom camera in and out.
Middle button click: center camera on atom.
Right button hold and move: translate camera in screen plane.
For more information, see the docs.
Wernet Nilsson criteria (MDTraj)
- Wernet Nilsson criteria (MDTraj)
- GetContacts criteria
- Salt bridges
- Van der Waals
- Water bridges
- Extended water bridges
- Interacting pairs
- Current frame
|Show Polar residues|
Show waters within
|Å of protein|